| East |
| Week 1 |
| 9/3 | Asahi Beer Silver Star | All Mitsubishi Lions | 24-0 |
| 9/4 | Obic Seagulls | Nihon Unisys Bulls | 52-7 |
| 9/5 | All Tōkyō Gas Creators | Fuji Xerox Minerva AFC | 7-14 |
| Week 2 |
| 9/12 | Obic Seagulls | Fuji Xerox Minerva AFC | 65-3 |
| 9/13 | All Mitsubishi Lions | Nihon Unisys Bulls | 14-17 |
| 9/13 | Asahi Beer Silver Star | All Tōkyō Gas Creators | 34-14 |
| Week 3 |
| 9/24 | Obic Seagulls | All Tōkyō Gas Creators | 40-17 |
| 9/27 | Asahi Beer Silver Star | Nihon Unisys Bulls | 62-0 |
| 9/27 | All Mitsubishi Lions | Fuji Xerox Minerva AFC | 23-7 |
| Week 4 |
| 10/10 | All Tōkyō Gas Creators | Nihon Unisys Bulls | 33-35 |
| 10/10 | Asahi Beer Silver Star | Fuji Xerox Minerva AFC | 56-7 |
| 10/11 | Obic Seagulls | All Mitsubishi Lions | 10-6 |
| Week 5 |
| 10/24 | All Mitsubishi Lions | All Tōkyō Gas Creators | 16-14 |
| 10/24 | Obic Seagulls | Asahi Beer Silver Star | 13-16 |
| 10/25 | Fuji Xerox Minerva AFC | Nihon Unisys Bulls | 3-13 |
| Team | W | L | T | PF | PA | Pts |
| Asahi Beer Silver Star | 5 | 0 | 0 | 192 | 34 | 10 |
| Obic Seagulls | 4 | 1 | 0 | 180 | 49 | 8 |
| Nihon Unisys Bulls | 3 | 2 | 0 | 72 | 164 | 6 |
| All Mitsubishi Lions | 2 | 3 | 0 | 59 | 72 | 4 |
| Fuji Xerox Minerva AFC | 1 | 4 | 0 | 34 | 164 | 2 |
| All Tōkyō Gas Creators | 0 | 5 | 0 | 85 | 139 | 0 |
|
| Central |
| Week 1 |
| 9/2 | Fujitsu Frontiers | IBM BigBlue | 24-7 |
| 9/6 | Meiji Yasuda Pirates | Hurricanes AFC | 17-9 |
| 9/7 | Kajima Deers | Bullseyes Tōkyō | 66-0 |
| Week 2 |
| 9/19 | Fujitsu Frontiers | Meiji Yasuda Pirates | 34-0 |
| 9/19 | Kajima Deers | Hurricanes AFC | 58-0 |
| 9/20 | IBM BigBlue | Bullseyes Tōkyō | 49-16 |
| Week 3 |
| 10/3 | Kajima Deers | Meiji Yasuda Pirates | 38-7 |
| 10/4 | IBM BigBlue | Hurricanes AFC | 31-16 |
| 10/4 | Fujitsu Frontiers | Bullseyes Tōkyō | 38-13 |
| Week 4 |
| 10/11 | Fujitsu Frontiers | Hurricanes AFC | 24-0 |
| 10/12 | Meiji Yasuda Pirates | Bullseyes Tōkyō | 19-14 |
| 10/12 | Kajima Deers | IBM BigBlue | 24-14 |
| Week 5 |
| 10/24 | Hurricanes AFC | Bullseyes Tōkyō | 35-10 |
| 10/25 | IBM BigBlue | Meiji Yasuda Pirates | 47-7 |
| 10/25 | Kajima Deers | Fujitsu Frontiers | 20-22 |
| Team | W | L | T | PF | PA | Pts |
| Fujitsu Frontiers | 5 | 0 | 0 | 142 | 40 | 10 |
| Kajima Deers | 4 | 1 | 0 | 206 | 43 | 8 |
| IBM BigBlue | 3 | 2 | 0 | 148 | 87 | 6 |
| Meiji Yasuda Pirates | 2 | 3 | 0 | 50 | 142 | 4 |
| Hurricanes AFC | 1 | 4 | 0 | 60 | 140 | 2 |
| Bullseyes Tōkyō | 0 | 5 | 0 | 53 | 207 | 0 |
|
| West |
| Week 1 |
| 9/5 | Panasonic Denko Impulse | As One Black Eagles | 31-0 |
| 9/5 | Asahi Soft Drinks Challengers | Suita Marvies | 21-6 |
| 9/6 | Elecom Kōbe Finies | Asahi Pretec Golden Fighters | 16-0 |
| Week 2 |
| 9/20 | Elecom Kōbe Finies | As One Black Eagles | 7-3 |
| 9/20 | Panasonic Denko Impulse | Suita Marvies | 38-0 |
| 9/20 | Asahi Soft Drinks Challengers | Asahi Pretec Golden Fighters | 31-0 |
| Week 3 |
| 9/27 | Suita Marvies | Asahi Pretec Golden Fighters | 48-0 |
| 9/27 | Panasonic Denko Impulse | Elecom Kōbe Finies | 61-6 |
| 9/27 | Asahi Soft Drinks Challengers | As One Black Eagles | 28-0 |
| Week 4 |
| 10/10 | Suita Marvies | As One Black Eagles | ot 36-30 |
| 10/10 | Panasonic Denko Impulse | Asahi Pretec Golden Fighters | 66-0 |
| 10/10 | Asahi Soft Drinks Challengers | Elecom Kōbe Finies | 31-0 |
| Week 5 |
| 10/24 | Asahi Soft Drinks Challengers | Panasonic Denko Impulse | 14-32 |
| 10/25 | Asahi Pretec Golden Fighters | As One Black Eagles | 21-15 |
| 10/25 | Elecom Kōbe Finies | Suita Marvies | 11-14 |
| Team | W | L | T | PF | PA | Pts |
| Panasonic Denko Impulse | 5 | 0 | 0 | 228 | 20 | 10 |
| Asahi Soft Drinks Challengers | 4 | 1 | 0 | 125 | 38 | 8 |
| Suita Marvies | 3 | 2 | 0 | 104 | 100 | 6 |
| Elecom Kōbe Finies | 2 | 3 | 0 | 40 | 109 | 4 |
| Asahi Pretec Golden Fighters | 1 | 4 | 0 | 21 | 176 | 2 |
| As One Black Eagles | 0 | 5 | 0 | 48 | 123 | 0 |
|
| 2nd Stage |
| Block A |
| 11/8 | Suita Marvies | Asahi Beer Silver Star | 20-22 |
| 11/15 | Suita Marvies | Kajima Deers | 19-32 |
| 11/23 | Asahi Beer Silver Star | Kajima Deers | 14-24 |
| Team | W | L | T | PF | PA | Pts |
| Kajima Deers | 2 | 0 | 0 | 56 | 33 | 4 |
| Asahi Beer Silver Star | 1 | 1 | 0 | 36 | 44 | 2 |
| Suita Marvies | 0 | 2 | 0 | 39 | 54 | 0 |
|
| 2nd Stage |
| Block B |
| 11/7 | Fujitsu Frontiers | Nihon Unisys Bulls | 61-0 |
| 11/14 | Nihon Unisys Bulls | Asahi Soft Drinks Challengers | 13-55 |
| 11/22 | Asahi Soft Drinks Challengers | Fujitsu Frontiers | 21-43 |
| Team | W | L | T | PF | PA | Pts |
| Fujitsu Frontiers | 2 | 0 | 0 | 104 | 21 | 4 |
| Asahi Soft Drinks Challengers | 1 | 1 | 0 | 76 | 56 | 2 |
| Nihon Unisys Bulls | 0 | 2 | 0 | 13 | 116 | 0 |
|
| 2nd Stage |
| Block C |
| 11/8 | IBM BigBlue | Panasonic Denko Impulse | 7-49 |
| 11/15 | Obic Seagulls | IBM BigBlue | 44-14 |
| 11/22 | Panasonic Denko Impulse | Obic Seagulls | 23-20 |
| Team | W | L | T | PF | PA | Pts |
| Panasonic Denko Impulse | 2 | 0 | 0 | 72 | 27 | 4 |
| Obic Seagulls | 1 | 1 | 0 | 64 | 37 | 2 |
| IBM BigBlue | 0 | 2 | 0 | 21 | 93 | 0 |
|
| Final Stage | | |
| Semifinals | | |
| 12/5 | Panasonic Denko Impulse | Kajima Deers | 26-34 |
| 12/6 | Fujitsu Frontiers | Asahi Beer Silver Star | 31-21 |
| Japan X Bowl | | |
| 12/21 | Kajima Deers | Fujitsu Frontiers | 21-14 |
| Rice Bowl | | |
| 1/3 | Kajima Deers | Kansai University Kaisers | 19-16 |
|